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Peptide·plain sequence-like

ATLPC0026740

ATLPC0026740

YGGFM

Routes
Compare in workbenchDownload releaseAPI JSON
  • Length
    5 aa
  • Monoisotopic mass
    573.2 Da
  • Net charge @ pH 7.4
    0.00
  • Isoelectric point
    6.10
  • GRAVY
    0.520
On this page
  • 01 Sequence & molecular identity
  • 02 Physicochemical profile
  • 03 Distribution / Barrier
  • 04 Metabolic & Proteolytic Stability
  • 05 Excretion / Persistence
  • 06 Evidence landscape
  • 07 Product context
  • 08 Identity & reference map
  • 09 Data access & reproducibility
Coveragecounts only · not riskATLPC0026740
  • Measurements
    24
  • Endpoints
    3
  • Domains
    3/5
  • Products
    —
  • 2 stability measurements
  • 12 clearance measurements
  • No immunogenicity context
  • 2 liability motifs
Jump to domain

Open the matching evidence section below

All evidence index · 24
Exposure / Absorption
No evidence
Distribution / Barrier
10 measurements
Metabolic & Proteolytic Stability
2 measurements
Excretion / Persistence
12 measurements
Toxicity / Safety
No evidence
01

Sequence & molecular identity

1 forms

Reviewed sequence, peptidoform forms, chemical representation, 3D references, and covalent topology used to interpret this peptide identity.

Sequence & peptidoform

·
Identity summaryCanonical sequence only
Identity status
Canonical sequence only
Residues
5
Peptidoform features
0
Documented molecular forms
1
Representations
2
Documented molecular forms1 form linked to this peptide identity
FormTopologyModificationsConnectionsRepresentationsMeasurements
ATLPF0029076———Notation only14
Residue view
Residue display
5 residues
Y1G2G3F4M5
Secondary structureα-helix (H)β-strand (E)coil (C)
Side-chain classNonpolarPolarBasic (+)Acidic (−)Modified

Soft tints mark standard side-chain classes for scanning. Primary emphasis is reserved for reported modifications, termini, secondary-structure tracks, and topology links.

Peptidoform features

Features are shown only when a reported notation or topology record supports them.

No terminal modification, residue-level marker, disulfide, staple, coordination, or other topology signal is currently available.

Structure & chemistry

·
Chemical representationsequence / HELM only
Representation class

How the current release can interpret this identity chemically.

plain sequence-like
Parent-residue sequence

Residue string used for positional interpretation when available.

YGGFM
HELM

Polymer notation for modified peptide representation when available.

Not available
SMILES

Chemical graph string used for atom-level 2D depiction when available.

Not available
No atom-level graph

A reviewed SMILES is required before a 2D molecular depiction can be shown. Sequence and HELM remain useful for identity interpretation, but they do not replace a chemical graph.

3D structure references1 reference
3D coordinates·Exact PDB matchexperimental
Exact PDB match·reference selected·length 5 aa·confidence experimental
LinkMethodConfidenceMatch
OpenExperimental coordinate entryexperimental5 aa
Covalent topology & modificationsnone
Exact topology not established

No reviewed form-level topology or residue-level connection annotation is attached to this peptide in the current release. This is not evidence that every molecular form is linear or unmodified.

02

Physicochemical profile

4 descriptors

Computed sequence-derived descriptors and any measured physicochemical evidence such as lipophilicity. Computed values are interpretation aids, not experimental ADMET measurements.

·
Core descriptors5 aa · pI 6.1 · GRAVY 0.52
Length
5 aa
Monoisotopic mass
573.23 Da
Average mass
573.66 Da
Net charge at pH 7.4
0.00
Estimated pI
6.10
GRAVY
0.520
KD-positive residues
40.0%
Aromatic residues
40.0%
Developability interpretation
Ionization context
pH 7.4 separated from pI
Hydrophobicity balance
Leans hydrophobic
Amphipathic moment (μH)
0.49
Computation boundary
Standard-sequence only
Charge & residue composition
pH charge context

Modeled net charge across common formulation and assay pH checkpoints.

pH 2
0.98
pH 5
0.04
pH 6
0.00
pH 7.4
-0.06
pH 9
-0.79
pH 12
-1.99
Residue-class composition

Grouped composition is often more interpretable than a long amino-acid list.

Hydrophobic aliphatic (A,V,I,L,M)
1 · 20.0%
Aromatic (F,W,Y)
2 · 40.0%
Conformational / sulfur (G,P,C)
2 · 40.0%
Top residues
G240.0%M120.0%F120.0%Y120.0%
Hydropathy & amphipathic windows
Hydropathy windows

Seven-residue sliding windows expose local patches hidden by whole-sequence GRAVY.

Most hydrophobic window
1-5
YGGFM
GRAVY 0.520
Most hydrophilic window
1-5
YGGFM
GRAVY 0.520
1 local hydropathy window scanned. A local patch is context for solubility, adsorption, and membrane interaction review, not a standalone endpoint.
Amphipathic-window scan

Top alpha-helix hydrophobic-moment windows across 12, 15, 18, and 21 residues.

Sequence is shorter than the local amphipathic-window sizes used here.
Sequence-liability cues
Sequence-liability notes

Motifs are review prompts for formulation or CMC interpretation; they are not degradation predictions.

Oxidation-sensitive residues
M · pos 5
Met, Trp, and Cys residues can merit formulation review for oxidation or covalent-state sensitivity.
Pro/Gly-rich sequence
P/G · pos 2, 3
High Pro/Gly content can affect local flexibility and secondary-structure propensity.
Method notes

Charge model: side-chain pKa D 3.9, E 4.1, C 8.5, Y 10.1, H 6.5, K 10.8, R 12.5 with EMBOSS termini. pI is estimated by binary search on modeled net charge. Hydropathy uses Kyte-Doolittle values; hydrophobic moment follows the Eisenberg alpha-helix vector-sum convention. When the basis is a parent-residue sequence, modified chemistry is intentionally not inferred.

Computed developability descriptors

Deterministic descriptors computed from the reviewed sequence or chemical structure (RDKit), each anchored to a literature method. These are computed estimates for developability interpretation — not experimental measurements — and are validated against independent reference implementations.

Sequence-derived

Computed from the standard parent-residue sequence; protein-origin metrics defined at any length.

Aliphatic index
0.00
Instability index
15.7

At or below 40 — predicted stable in vitro.

Boman index
-1.41 kcal/mol
Molar extinction coefficient (280 nm)
1,490 M⁻¹·cm⁻¹

A280 (1 g/L) ≈ 2.60

Structure-derived descriptors are not shown because this identity has no resolved chemical structure (SMILES). This is a known coverage gap for disulfide-rich and unresolved peptidoforms, not a computation error.

03

Distribution / Barrier

10 records

What is known about distribution, binding, permeability, or barrier crossing?

Evidence records
10
Complete canonical measurements and observations attached to this domain.
Endpoint scope
1
Formal ADMET endpoints represented for this peptide.
Matched-context in preview
0
Quantitative results that may be analysed only with scientifically compatible records.
Reported results in preview
6
Qualitative, narrative, or review-first results interpreted in their source context.
Endpoints in scopeBBB penetration
Loading 10 Distribution / Barrier records…
Barrier and permeability assay context

PAMPA, Caco-2, MDCK/RRCK, and BBB findings are assay/model contexts under Distribution / Barrier. They should not be read as interchangeable measurements.

PAMPA
0

artificial membrane

Caco-2
0

cell monolayer

MDCK
0

cell monolayer

RRCK
0

cell monolayer

BBB
6

barrier evidence

04

Metabolic & Proteolytic Stability

2 records

How stable is the peptide in biological matrices or protease systems?

Evidence records
2
Complete canonical measurements and observations attached to this domain.
Endpoint scope
1
Formal ADMET endpoints represented for this peptide.
Matched-context analysis
2
Quantitative results that may be analysed only with scientifically compatible records.
Reported-result review
0
Qualitative, narrative, or review-first results interpreted in their source context.
Endpoints in scopeSerum/plasma stability
Evidence interpretation

Result type, analysis use, and source-check status are kept separate so a numerical value is not mistaken for a universally comparable result.

Eligible for matched-context analysis
Quantitative results whose endpoint and context must still be matched before analysis.
2
Interpret as reported
Qualitative, narrative, or review-first findings preserved in source context.
0
Supporting context only
Reference, label, clinical, or supporting context for interpretation.
0
Review before analysis
Records whose present structure does not establish a safe analysis role.
0
Evidence by endpoint

Rows are grouped by endpoint so value, assay context, interpretation layer, and reference can be checked in place.

·
Serum/plasma stability2 records · 2 matched-context · 0 as reported · 0 context only · 0 review required
#ValueAnalysis useAssay / modelResult contextReference
1

< 2 minutes

< 120 seconds
Eligible when experimental context matches

RP-HPLC · monkey · Rhesus monkey plasma

Result: Upper-bound measurement · Molecular form: ATLPF0029076 · Dose/window: 1-20mM · Time: Blood collected 5-60 minutes after peptide infused · Proteases from rhesus monkey plasma · in vitro · Source: Primary reference linked

Reference
2

12.8 minutes

768 seconds
Eligible when experimental context matches

TLC (Thin-layer chromatography) · human · Human plasma

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 300pg (pooled platelet-poor plasma) · Human plasma proteases · in vitro · Source: Primary reference linked

Reference
05

Excretion / Persistence

12 records

What evidence describes clearance or persistence?

Evidence records
12
Complete canonical measurements and observations attached to this domain.
Endpoint scope
1
Formal ADMET endpoints represented for this peptide.
Matched-context analysis
12
Quantitative results that may be analysed only with scientifically compatible records.
Reported-result review
0
Qualitative, narrative, or review-first results interpreted in their source context.
Endpoints in scopeHalf Life
Evidence interpretation

Result type, analysis use, and source-check status are kept separate so a numerical value is not mistaken for a universally comparable result.

Eligible for matched-context analysis
Quantitative results whose endpoint and context must still be matched before analysis.
12
Interpret as reported
Qualitative, narrative, or review-first findings preserved in source context.
0
Supporting context only
Reference, label, clinical, or supporting context for interpretation.
0
Review before analysis
Records whose present structure does not establish a safe analysis role.
0
Evidence by endpoint

Rows are grouped by endpoint so value, assay context, interpretation layer, and reference can be checked in place.

·
Half Life12 records · 12 matched-context · 0 as reported · 0 context only · 0 review required
#ValueAnalysis useAssay / modelResult contextReference
1

47 ± 1 Minutes

2820 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Ala1]sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
2

74 ± 2 Minutes

4440 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Ala2]sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
3

109 ± 8 Minutes

6540 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Ala3]sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
4

52 ± 2 Minutes

3120 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Ala5]sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
5

114 ± 2 Minutes

6840 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Arg2]sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
6

116 ± 1 Minutes

6960 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [His2]opiorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
7

139 ± 3 Minutes

8340 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Pro4]opiorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
8

53 ± 1 Minutes

3180 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM [Ser4]sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
9

94 ± 2 Minutes

5640 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM Opiorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
10

78 ± 2 Minutes

4680 seconds
Eligible when experimental context matches

RP-HPLC · Tris HCl buffer with 0.156 mM Sialorphin inhibitor

Result: Reported point value · Molecular form: ATLPF0029076 · Dose/window: 0.0413 mM · NEP (5.687 Nm) · In Vitro · Source: Primary reference linked

Reference
1–10 / 12
06

Evidence landscape

24 records

Cross-domain evidence distribution and measurement-level detail. 20 of 24 evidence records are included in the profile preview; the full index is loaded below.

Loading 24 measurements…
07

Product context

Product-level route, label, and clinical context that frames peptide-level evidence. A peptide-level summary only; product pages keep the full drilldown.

No product association in this release

This peptide is currently interpreted from sequence, structure, physicochemical, and ADMET evidence only.

Browse products
08

Identity & reference map

24 sources

Reference-level support for checking reported names, sequence notation, and peptide identity agreement.

·
Summary8 reference groups
Identity type
canonical sequence
Reported notation
1
Reference groups
8
Measurements
24
ATL peptide ID
ATLPC0026740
Identity concordance
Identity concordance
Exact reported notation

Reported sequence string matches the current peptide notation.

2 / 24
Parent-residue compatible

Reported notation differs, but resolves to the same parent-residue display.

0 / 24
Different notation

Reported notation does not resolve to the current display sequence.

0 / 24
Source sequence not captured

No source-specific sequence was captured for comparison; this is not interpreted as agreement or disagreement.

22 / 24
Reported sequence notation
Exact2 references
YGGFM
Current identity
YGGFM
Reported names
brainpeps_observation_v2_29_3_35_13c8eadcbebccd7797e4brainpeps_observation_v2_29_3_35_5476af0d4b4ef3f5dd81
Reference map8 reference groups
Reference map

Grouped by reference link, with endpoint scope and reported identity kept visible.

ReferenceSupportsReported identityRecords
Reference
Open
Persistence
Half Life
No reported alias
12 identity
12 evidence
Reference
Open
Distribution
Blood Brain Barrier Penetration
No reported alias
2 identity
2 evidence
Reference
Open
Distribution
Blood Brain Barrier Penetration
No reported alias
2 identity
2 evidence
Reference
Open
Distribution
Blood Brain Barrier Penetration
No reported alias
2 identity
1 evidence
Reference
Open
Distribution
Blood Brain Barrier Penetration
brainpeps_observation_v2_29_3_35_5476af0d4b4ef3f5dd81
YGGFMexact
2 identity
1 evidence
Reference
Open
Stability
Serum Plasma Stability
No reported alias
1 identity
1 evidence
Reference
Open
Identity only
brainpeps_observation_v2_29_3_35_13c8eadcbebccd7797e4
YGGFMexact
2 identity
0 evidence
Reference
Open
Stability
Serum Plasma Stability
No reported alias
1 identity
1 evidence
09

Data access & reproducibility

Stable record access, analysis-ready files, and scripted retrieval for reproducing this profile view.

·
Record scopePublic release
ATL peptide ID
ATLPC0026740
Identity type
canonical sequence
ADMET endpoints
3
Evidence records
24
Reference groups
8
Release view
Public release
Data access

Structured peptide profile

JSON

Peptide-specific profile used by this page, including identity and evidence context.

Open JSON

Peptide catalogue

TSV

Complete frozen peptide table. Filter the ATL peptide ID column locally to isolate this record.

Download catalogue

Measurement catalogue

TSV

Complete frozen measurement table. Join or filter by ATL peptide ID for peptide-level analysis.

Download measurements
Programmatic access

The request returns the same structured peptide record used by this profile. The tabular downloads are complete frozen release tables and should be filtered locally by ATL peptide ID.

Open endpoint
GET /api/v1/peptides/ATLPC0026740
open
curl -sS 'https://admetatlas.scbdd.com/api/v1/peptides/ATLPC0026740' \
  -H 'accept: application/json' \
  -H 'X-Visibility: public_release'
ADMETatlas
peptide evidence atlas

ADMETatlas is an open, curated atlas of ADMET evidence for therapeutic peptides — spanning developability, membrane permeability and blood–brain-barrier transport, immune-recognition context, and approved-product context. Every measurement stays linked to its original source, with stable identifiers and transparent curation, so results can be traced, cited, and reproduced.

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